This is a set of protocols for doing genomic data analysis – specifically, de novo mRNAseq assembly and de novo metagenome assembly – in the cloud.
The latest released version of these protocols can always be found at:
You are reading v0.8.4; please use the following URL in citations and discussions:
Brown, C. Titus; Scott, Camille; Crusoe, Michael; Sheneman, Leigh;
Rosenthal, Josh; Adina Howe (2013): khmer-protocols documentation.